We have released a new update of the OMA Browser. It is the 26th release covering now 2326 complete genomes. As usually we provide updated HOGs, OMA Groups and gene centric orthology predictions across all domains of life, with updated crosslinks to the latest UniProtKB, RefSeq and Ensembl ids and up-to-date Gene Ontology annotations.
In this release we added the following new genomes:
- 13 new Metazoa
- Branchiostoma lanceolatum (Common lancelet)
- Cynoglossus semilaevis (Tongue sole)
- Haplochromis burtoni (Burton's mouthbrooder)
- Neolamprologus brichardi (Fairy cichlid)
- Esox lucius (Northern pike)
- Capra hircus (Goat)
- Equus asinus
- Parus major (Great tit)
- Junco hyemalis (Dark-eyed junco)
- Serinus canaria (Island canary)
- Melopsittacus undulatus (Budgerigar)
- Chelonoidis abingdonii (Abingdon island giant tortoise)
- Xenopus laevis (African clawed frog)
- 6 new Viridiplantae
- Picea glauca (White spruce)
- Picea sitchensis (Sitka spruce)
- Pinus taeda (Loblolly pine)
- Zostera marina (Eelgrass)
- Daucus carota subsp. sativus (Carrot)
- Nicotiana tabacum (Common tobacco)
- 15 new Opisthokonta
- Fonticula alba (Slime mold)
- Candida tenuis (Yeast)
- Branchiostoma lanceolatum (Common lancelet)
- Cynoglossus semilaevis (Tongue sole)
- Haplochromis burtoni (Burton's mouthbrooder)
- Neolamprologus brichardi (Fairy cichlid)
- Esox lucius (Northern pike)
- Capra hircus (Goat)
- Equus asinus
- Parus major (Great tit)
- Junco hyemalis (Dark-eyed junco)
- Serinus canaria (Island canary)
- Melopsittacus undulatus (Budgerigar)
- Chelonoidis abingdonii (Abingdon island giant tortoise)
- 4 new Protists
- Cavenderia fasciculata (strain SH3) (Slime mold)
- Guillardia theta
- Phytophthora sojae (strain P6497) (Soybean stem and root rot agent)
- Plasmopara halstedii (Downy mildew of sunflower)
- 1 new Archaea
- 14 new Bacteria
- Nocardioides simplex
- Streptomyces albulus
- Streptomyces ambofaciens (strain ATCC 23877 / 3486 / DSM 40053 / JCM 4204 / NBRC 12836 / NRRL B-2516)
- Streptomyces pristinaespiralis (strain ATCC 25486 / DSM 40338 / CBS 914.69 / JCM 4507 / NBRC 13074 / NRRL 2958 / 5647)
- Streptomyces tsukubensis (strain DSM 42081 / NBRC 108919 / NRRL 18488 / 9993)
- Streptomyces viridosporus (strain ATCC 14672 / DSM 40746 / JCM 4963 / KCTC 9882 / NRRL B-12104 / FH 1290)
- Thermosulfidibacter takaii (strain DSM 17441 / JCM 13301 / NBRC 103674 / ABI70S6)
- Chroococcidiopsis thermalis (strain PCC 7203)
- Clostridium sp. (strain ATCC 29733 / VPI C48-50)
- Methylobacter tundripaludum (strain ATCC BAA-1195 / DSM 17260 / SV96)
- Hydrogenovibrio marinus
- Vibrio nereis
- Vibrio sp. (strain N418)
- Defluviitoga tunisiensis
- Glycine max (Soybean)
- Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (taxon id: 640081): DECSP → AZOOP
- Bacillus mycoides (strain KBAB4) (taxon id: 315730): BACWK → BACMK
- Crocosphaera subtropica (strain ATCC 51142 / BH68) (taxon id: 43989): CYAA5 → CROS5
- Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (taxon id: 264198): CUPNJ → CUPPJ
- Cutibacterium acnes (strain SK137) (taxon id: 553199): PROAS → CUTAS
- Gloeothece citriformis (strain PCC 7424) (taxon id: 65393): CYAP7 → GLOC7
- Gloeothece verrucosa (strain PCC 7822) (taxon id: 497965): CYAP2 → GLOV7
- Gottschalkia acidurici (strain ATCC 7906 / DSM 604 / BCRC 14475 / CIP 104303 / NCIMB 10678 / 9a) (taxon id: 1128398): CLOA9 → GOTA9
- Hungateiclostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) (taxon id: 720554): CLOCD → HUNCD
- Hungateiclostridium thermocellum (strain DSM 1313 / LMG 6656 / LQ8) (taxon id: 637887): CLOTL → HUNT1
- Hungateiclostridium thermocellum (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) (taxon id: 203119): CLOTH → HUNT2
- Lentzea aerocolonigenes (taxon id: 68170): NOCAE → LENAE
- Parageobacillus thermoglucosidasius (strain C56-YS93) (taxon id: 634956): GEOTC → PARTC
- Pectobacterium parmentieri (taxon id: 1905730): PECSS → PECPM
- Pelodictyon luteolum (strain DSM 273 / 2530) (taxon id: 319225): CHLL7 → PELLD
- Rippkaea orientalis (strain PCC 8801) (taxon id: 41431): CYAP8 → RIPO1
- Rippkaea orientalis (strain PCC 8802) (taxon id: 395962): CYAP0 → RIPO2
- Ruminiclostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) (taxon id: 394503): CLOCE → RUMCH
- Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (taxon id: 273057): SULSO → SACS2
- Saccharolobus solfataricus (strain 98/2) (taxon id: 555311): SULS9 → SACS9
- Trichormus variabilis (strain ATCC 29413 / PCC 7937) (taxon id: 240292): ANAVT → TRIV2
A full list of species in the OMA Browser and their update dates is available on our release information page.
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