We have released a new version of the OMA Browser. It is the 30th release covering now 2,851 genomes. As usually we provide updated HOGs, OMA Groups and gene centric orthology predictions across all domains of life, with updated crosslinks to the latest UniProtKB, RefSeq and Ensembl ids and up-to-date Gene Ontology annotations.
This release contains many new features: We now provide ancestral gene ontology function annotations, compute (ancestral) GO enrichment analysis and display ancestral synteny reconstruction.
New genomes
In this release we added the following new genomes:
- 3 new Insects
- Bactrocera dorsalis (Oriental fruit fly)
- Aedes albopictus (Asian tiger mosquito)
- Trichogramma pretiosum (Parasitoid wasp)
- 2 new Other Metazoa
- Priapulus caudatus (Priapulid worm)
- Echinococcus granulosus (Hydatid tapeworm)
- 2 new Plants
- Aegilops tauschii subsp. strangulata (Goatgrass)
- Cajanus cajan (Pigeon pea)
- 11 new Fungi
- Neolecta irregularis (strain DAH-3)
- Aspergillus parasiticus
- Xylona heveae (strain CBS 132557 / TC161)
- Zymoseptoria tritici (strain CBS 115943 / IPO323) (Speckled leaf blotch fungus)
- Glarea lozoyensis (strain ATCC 20868 / MF5171)
- Metarhizium rileyi (strain RCEF 4871)
- Purpureocillium lilacinum
- Thanatephorus cucumeris (strain AG1-IA) (Rice sheath blight fungus)
- Pycnoporus cinnabarinus (Cinnabar-red polypore)
- Spraguea lophii (strain 42_110) (Microsporidian parasite)
- Mucor circinelloides f. circinelloides (strain 1006PhL) (Mucormycosis agent)
- 5 new Protists
- Entamoeba histolytica (strain ATCC 30459 / HM-1:IMSS / ABRM)
- Tieghemostelium lacteum (Slime mold)
- Thecamonas trahens ATCC 50062
- Leptomonas pyrrhocoris (Firebug parasite)
- Plasmodium gallinaceum
- 1 new Proteobacteria
- 1 new Firmicutes
- 3 new Actinobacteriota
- Actinobacteria bacterium CROMO_BS_222_8
- Actinobacteria bacterium MAG-41
- Actinobacteria bacterium Dino_bin11
- 261 new Other Bacteria
- bacterium Zod_Metabat.1143
- Candidatus Cloacimonetes bacterium 4572_55
- Calditrichaeota bacterium co234_bin30
- candidate division LCP-89 bacterium B3_LCP
- Calditrichaeota bacterium SuakinDeep_MAG45_3
- bacterium BS750m-G18
- bacterium Aved_18-Q3-R54-62_MAXAC.418
- Gemmatimonadetes bacterium ARS69
- Candidatus Abyssubacteria bacterium SURF_5
- bacterium (candidate division B38) B3_B38
- bacterium HR11 HRbin11
- Sulfidibacter corallicola
- Acidobacteria bacterium Mor1
- Holophagales bacterium EsbW_18-Q3-R4-48_BAT3C.4_cln
- Acidobacteria bacterium s2_autometa_2-0
- Luteitalea pratensis
- Candidatus Aerophobetes bacterium Ae_b3b
- Abitibacteriaceae bacterium CP_BM_RX_R8_36
- Armatimonas rosea
- Fimbriimonas ginsengisoli
- Armatimonadetes bacterium AS09scLD_344
- Armatimonadetes bacterium NC_groundwater_1868_Pr3_B-0.1um_69_17
- Armatimonadetes bacterium Ch1
- Abditibacteriota bacterium RGIG7931
- Atribacter laminatus
- Candidatus Atribacteria bacterium AS21ysBPME_310
- Candidatus Coatesbacteria bacterium Zod_Metabat.233
- bacterium BMS3Abin14
- candidate division KSB1 bacterium BS750m-G25
- Candidatus Omnitrophica bacterium BS750m-G34
- Ignavibacteriales bacterium CG07_land_8_20_14_0_80_59_12
- Bacteroidetes bacterium MAG_11
- Chlorobi bacterium Kalu_18-Q3-R12-55_MAXAC.169
- Candidatus Kryptobacter tengchongensis JGI-3
- Ignavibacteria bacterium Vibo_18-Q3-R45-57_BATAC.435
- Ignavibacteriales bacterium NC_groundwater_1911_Pr3_S2p5_40_15
- Bdellovibrionales bacterium SZAS-2
- Deltaproteobacteria bacterium NC_groundwater_823_Pr1_B-0.1um_55_34
- Candidatus Micrarchaeota archaeon B47_G15
- Fluviispira sanaruensis
- Deltaproteobacteria bacterium UWPOB_DELTA4
- Bdellovibrionales bacterium SZAS-4
- Deltaproteobacteria bacterium RIFOXYA12_FULL_61_11 none
- bacterium new MAG-396
- Deltaproteobacteria bacterium GWA2_38_16 none
- Candidatus Bipolaricaulis sibiricus Ch78
- Candidatus Omnitrophica bacterium Modern_marine.mb.319
- Elusimicrobia bacterium HGW-Elusimicrobia-2
- Elusimicrobia bacterium Zod_Metabat.862
- Deltaproteobacteria bacterium M_MetaBat.58
- Nitrospirae bacterium CG2_30_70_394
- bacterium MAG_59
- candidate division CSSED10-310 bacterium Zod_Metabat.419
- Candidatus Schekmanbacteria bacterium NC_groundwater_415_Ag_B-0.1um_66_15
- bacterium Zod_Metabat.886
- Caldithrix abyssi
- bacterium HR19 HRbin19
- Chloroflexi bacterium NC_groundwater_1535_Pr4_S-0.65um_62_11
- Chloroflexi bacterium FW602_bin.22
- Ktedonosporobacter rubrisoli
- Chloroflexi bacterium MAG002
- Chloroflexi bacterium SB0661_bin_6
- Chloroflexi bacterium RRmetagenome_bin17
- Chloroflexi bacterium Baikal-deep-G117
- bacterium BIN46
- Candidatus Obscuribacter sp. Fred_18-Q3-R57-64_MAXAC.356
- Firmicutes bacterium AS04akNAM_72
- bacterium AS04akNAM_5
- Candidatus Delongbacteria bacterium ZodW_Metabat.17
- bacterium AalE_18-Q3-R2-46_BAT3C.1_cln
- Syntrophaceae bacterium UWMA-0184
- Dissulfurirhabdus thermomarina
- Deltaproteobacteria bacterium GWC2_55_46
- Deltaproteobacteria bacterium NC_groundwater_360_Ag_B-0.1um_69_10
- Deltaproteobacteria bacterium NC_groundwater_1540_Pr4_S-0.65um_55_10
- Proteobacteria bacterium C1.bin.36
- Proteobacteria bacterium SpSt-1152
- Desulfobacterales bacterium NC_groundwater_1491_Pr4_B-0.1um_43_5
- Candidatus Zymogeniaceaea bacterium Zod_Metabat.1292
- Deltaproteobacteria bacterium NC_groundwater_25_Pr7_B-0.1um_64_59
- Candidatus Anaeroferrophillus wilburensis Zod_Metabat.940
- Candidatus Dadabacteria bacterium MH-Pat-all_metabat2_32
- Deltaproteobacteria bacterium NC_groundwater_1648_Pr3_B-0.1um_61_38
- Candidatus Edwardsbacteria bacterium RifOxyA12_full_54_48 none
- Candidatus Eisenbacteria bacterium Fred_18-Q3-R57-64_MAXAC.354
- Elusimicrobia bacterium Zod_Metabat.39
- Candidatus Eremiobacteraeota bacterium CP_BM_RX_R8_7
- Armatimonadetes bacterium NC_groundwater_315_Ag_B-0.1um_31_7
- Armatimonadetes bacterium NC_groundwater_316_Ag_B-0.1um_55_8
- Candidatus Eremiobacteraeota bacterium SCN18_25_8_15_R3_B_62_28
- candidate division FCPU426 bacterium Zod_Metabat.219
- Myxococcales bacterium AS27yjCOA_30
- Candidatus Fermentibacteria bacterium Zod_Metabat.355
- Candidatus Raymondbacteria bacterium RIFOXYA2_FULL_49_16 none
- Firmicutes bacterium Ch29
- Carboxydocella thermautotrophica
- Thermanaerosceptrum fracticalcis
- Clostridia bacterium zrk5
- Clostridia bacterium AS04akNAM_38
- Dethiobacter alkaliphilus
- Alkalicella caledoniensis
- Firmicutes bacterium Bu02
- Firmicutes bacterium NC_groundwater_661_Ag_B-0.1um_63_60
- Clostridiales bacterium RBS10-35
- Firmicutes bacterium AS08sgBPME_412
- Limnochorda pilosa
- Firmicutes bacterium AS04akNAM_86
- Hydrogenispora ethanolica
- Firmicutes bacterium GB_MAG18_067
- PVC group bacterium (ex Bugula neritina AB1) AB1-3
- Candidatus Glassbacteria bacterium RIFCSPLOWO2_12_FULL_58_11 none
- Gemmatimonadetes bacterium ARS67
- Candidatus Goldbacteria bacterium HGW-Goldbacteria-1
- candidate division WS2 bacterium BS5B28
- Candidatus Hydrogenedens sp. RI_113
- Candidatus Dadabacteria bacterium J088
- Gemmatimonadetes bacterium SB0661_bin_27
- Candidatus Eisenbacteria bacterium Zod_Metabat.137
- Verrucomicrobia bacterium Zod_Metabat.1268
- bacterium MAG-57
- Nitrospirae bacterium NC_groundwater_240_Ag_S-0.2um_61_13
- Candidatus Tectomicrobia bacterium NC_groundwater_717_Ag_S-0.2um_59_8
- Candidatus Tectomicrobia bacterium NC_groundwater_748_Ag_S-0.65um_67_15
- Chlamydiae bacterium NC_groundwater_60_Pr7_S-0.65um_42_121
- Candidatus Desantisbacteria bacterium NC_groundwater_1497_Pr4_B-0.1um_33_3
- Candidatus Aureabacteria bacterium Zod_Metabat.1054
- Candidatus Coatesbacteria bacterium Zod_Metabat.53
- Oligoflexia bacterium Zod_Metabat.617
- Candidatus Dependentiae bacterium Go_SlDig_bin_425
- Candidatus Delongbacteria bacterium Go_SlDig_bin_59
- bacterium Modern_marine.mb.62
- bacterium BMS3Bbin03
- Calditrichaeota bacterium CLD2
- bacterium Fred_18-Q3-R57-64_MAXAC.288
- Candidatus Latescibacteria bacterium B68_G9
- Candidatus Latescibacteria bacterium Zod_Metabat.481
- Candidatus Latescibacteria bacterium UWMA-0219
- Candidatus Latescibacteria bacterium ADurb.Bin168
- Gemmatimonadetes bacterium RS821
- Candidatus Lindowbacteria bacterium RIFCSPLOWO2_12_FULL_62_27 none
- Candidatus Margulisbacteria bacterium RAAC_38_40
- Candidatus Termititenax aidoneus NkOx7-01
- candidate division WOR-1 bacterium RIFOXYB2_FULL_45_9 none
- Candidatus Marinimicrobia bacterium BS150m-G59
- Candidatus Marinimicrobia bacterium SuakinDeep_MAGBODY_4
- Candidatus Marinimicrobia bacterium MT.SAG.2
- Candidatus Marinimicrobia bacterium SI036_bin79
- Candidatus Mcinerneyibacteriota bacterium ZodW_Metabat.255
- Candidatus Methylomirabilis oxyfera none
- Candidatus Vecturithrix granuli none
- Candidatus Muirbacterium halophilum BM706
- Myxococcales bacterium AS27yjCOA_137
- Persicimonas caeni
- Deltaproteobacteria bacterium M_MaxBin.025
- Deltaproteobacteria bacterium NC_groundwater_736_Ag_S-0.65um_62_10
- Deltaproteobacteria bacterium NC_groundwater_1656_Pr3_B-0.1um_70_40
- Deltaproteobacteria bacterium Zod_Metabat.937
- Myxococcales bacterium SURF_8
- Deltaproteobacteria bacterium NC_groundwater_1649_Pr3_B-0.1um_64_26
- Myxococcales bacterium EAC29
- Deltaproteobacteria bacterium NP119
- Deltaproteobacteria bacterium NC_groundwater_80_Ag_B-0.1um_71_39
- Deltaproteobacteria bacterium Fred_18-Q3-R57-64_BATAC.308
- Deltaproteobacteria bacterium NC_groundwater_1655_Pr3_B-0.1um_70_22
- Deltaproteobacteria bacterium M1803
- Deltaproteobacteria bacterium Fred_18-Q3-R57-64_BAT3C.701
- candidate division NPL-UPA2 bacterium Unc8
- Nitrospinae bacterium NC_groundwater_1753_Pr3_B-0.1um_50_18
- Nitrospinae bacterium nPCRbin9
- Nitrospinae bacterium NC_groundwater_1503_Pr4_B-0.1um_56_23
- Nitrospinae bacterium NC_groundwater_948_Pr1_S-0.2um_39_25
- Nitrospinae bacterium RIFCSPLOWO2_12_FULL_45_22 none
- Nitrospirae bacterium NC_groundwater_1760_Pr3_B-0.1um_42_52
- Nitrospirae bacterium NC_groundwater_1776_Pr3_B-0.1um_70_102
- Nitrospirae bacterium NC_groundwater_891_Pr1_S2p5_65_34
- Nitrospirae bacterium NC_groundwater_1774_Pr3_B-0.1um_61_24
- bacterium H5_UNCL2
- Candidatus Omnitrophica bacterium B17_G2
- Candidatus Omnitrophica bacterium NC_groundwater_666_Ag_B-0.1um_57_48
- candidate division WWE3 bacterium W9_Combined_metabat1_117
- Candidatus Kerfeldbacteria bacterium NC_groundwater_1953_Pr3_S-0.2um_48_12
- Candidatus Andersenbacteria bacterium NC_groundwater_813_Pr1_B-0.1um_46_36
- candidate division CPR2 bacterium GW2011_GWC2_39_35 none
- bacterium CG_4_10_14_0_2_um_filter_33_32
- candidate division CPR3 bacterium GWF2_35_18 none
- bacterium Kalu_18-Q3-R12-55_BAT3C.2_fly
- bacterium (Candidatus Torokbacteria) CG_4_10_14_0_2_um_filter_35_8
- Candidatus Peregrinibacteria bacterium Lyne_18-Q3-R50-59_MAXAC.411_cln
- Patescibacteria group bacterium MM_PC_MetaG.mb.169
- Candidatus Pacebacteria bacterium LF-bin-483
- Candidatus Microgenomates bacterium NC_groundwater_396_Ag_B-0.1um_42_16
- Candidatus Gracilibacteria bacterium 28_42_T64
- Patescibacteria group bacterium Modern_marine.mb.211
- candidate division Kazan bacterium GW2011_GWA1_50_15 none
- Candidatus Roizmanbacteria bacterium Kalu_18-Q3-R12-55_MAXAC.194_uni
- Candidatus Niyogibacteria bacterium NC_groundwater_707_Ag_S-0.2um_45_26
- Patescibacteria group bacterium Baikal-deep-G193
- Patescibacteria group bacterium E44_bin74
- Berkelbacteria bacterium GW2011_GWE1_39_12 none
- candidate division WWE3 bacterium RAAC2_WWE3_1
- Planctomycetes bacterium B129_G9
- Planctomycetes bacterium B143_G9
- Planctomycetes bacterium Aved_18-Q3-R54-62_MAXAC.457
- Kuenenia stuttgartiensis
- Planctomycetes bacterium E44_bin39
- Planctomycetes bacterium J058
- Planctomycetes bacterium SRT547
- Planctomycetes bacterium NC_groundwater_38_Pr7_B-0.1um_65_11
- Planctomycetes bacterium NC_groundwater_1472_Ag_S-0.65um_69_29
- Planctomycetes bacterium NC_groundwater_1474_Ag_S-0.65um_73_34
- Planctomycetes bacterium Zod_Metabat.792
- Planctomycetes bacterium NC_groundwater_1801_Pr3_B-0.1um_50_33
- Planctomycetes bacterium NC_groundwater_288_Ag_S-0.65um_63_14
- Planctomycetes bacterium H5_PLA8
- Planctomycetes bacterium Poly30
- Planctomycetes bacterium NAT2
- Planctomycetes bacterium Fred_18-Q3-R57-64_MAXAC.456
- Candidatus Poribacteria bacterium Bin_402
- Candidatus Poribacteria bacterium PCPOR2b
- bacterium Zod_Metabat.1116
- candidate division Zixibacteria bacterium A-C077
- Candidatus Coatesbacteria bacterium Bin_172
- Candidatus Riflebacteria bacterium nHGRbin4
- candidate division KSB1 bacterium B21_G16
- bacterium Zod_Metabat.896
- Candidatus Acididesulfobacter guangdongensis AP2
- Candidatus Schekmanbacteria bacterium NC_groundwater_1829_Pr3_B-0.1um_41_52
- Spirochaetes bacterium Zod_Metabat.958
- Brevinema andersonii
- Spirochaetes bacterium GWE1_32_154 none
- Spirochaetales bacterium AS27yjCOA_89
- Spirochaetes bacterium Zod_Metabat.1289
- Spirochaetes bacterium COTS27
- Spirochaetes bacterium Go_SlDig_bin_244
- Candidatus Sumerlaea chitinivorans BY40
- candidate division TA06 bacterium E44_bin18
- candidate division Zixibacteria bacterium SM23_81
- Candidatus Entotheonella factor none
- Thermodesulfobium acidiphilum
- Deltaproteobacteria bacterium EsbW_18-Q3-R4-48_MAXAC.279_cln
- Chlamydiae bacterium AS06rmzACSIP_427
- bacterium RGIG7520
- Nitrospinaceae bacterium SI073_bin188
- Candidatus Hydrogenedentes bacterium J006
- Candidatus Desantisbacteria bacterium CG2_30_40_21
- bacterium OS_PC_MetaG.mb.171
- bacterium UBA9088
- bacterium UBA9089
- bacterium ADurb.Bin236
- Candidatus Cloacimonetes bacterium NORP72
- bacterium KR13_S3.mb.88
- bacterium SP4379
- Candidatus Eisenbacteria bacterium M_DeepCast_400m_m1_028
- Pontiella desulfatans
- candidate division TA06 bacterium 32_111
- Candidatus Cloacimonetes bacterium E29_bin43
- candidate division WOR-3 bacterium Zod_Metabat.912
- candidate division WOR-3 bacterium Zod_Metabat.145
- candidate division WOR-3 bacterium Ch92
- bacterium ADurb.Bin243
- candidate division Zixibacteria bacterium RBG-1 none
- 19 new Archaea
- Candidatus Altiarchaeales archaeon Bin_400
- Odinarchaeota archaeon (strain LCB_4)
- Nanoarchaeota archaeon KR13_N2.mb.113
- Thermococci archaeon B88_G9
- Candidatus Methanoliparum thermophilum NM1a
- Candidatus Methanohalarchaeum thermophilum HMET1
- Methanophagales archaeon G37ANME1
- Candidatus Huberarchaeum crystalense CG_4_9_14_0_8_um_filter_31_21
- Candidatus Fermentimicrarchaeum limneticum Sv326
- Candidatus Altiarchaeota archaeon DPANNHV_H2.bin.121
- Thermoplasmata archaeon B1_G16
- Thermoplasmatales archaeon MAG-13
- Candidatus Thermoplasmatota archaeon Zod_Metabat.400
- Candidatus Thalassarchaeum sp. BS30m-G33
- Euryarchaeota archaeon NC_groundwater_1308_Ag_S-0.2um_62_92
- Thaumarchaeota archaeon SJ3.Bin56
- Candidatus Methanosuratus subterraneum Ch88
- archaeon B48_G17
- Euryarchaeota archaeon ARS1358
- Gallus gallus (Chicken)
